msa-structure-prediction-pipeline
Skill running protein structure prediction via NVIDIA BioNeMo NIMs (MSA + OpenFold3).
About
NOTE: your protein sequence and the retrieved MSA alignment are transmitted to external NVIDIA-hosted APIs (health.api.nvidia.com) on every call. Use local NIM containers for confidential or proprietary sequences. Run a complete protein structure prediction pipeline using NVIDIA BioNeMo NIMs: search for MSA alignments with MSA-Search (ColabFold), then predict the structure with OpenFold3 using the retrieved alignments. Use this skill whenever the user wants to predict a protein structure with maximum accuracy using MSA context, run the full AlphaFold3-style pipeline, generate MSA-informed structure predictions, or improve structure prediction accuracy by providing evolutionary information. Triggers on: MSA structure prediction pipeline, structure prediction pipeline, MSA-informed prediction, OpenFold3, ColabFold MSA, AlphaFold3 pipeline, protein structure, homology search, a3m alignment, UniRef30, NIM microservice. This pipeline chains MSA-Search and OpenFold3.
At a glance
- Made for
- Developers
- Pricing
- Free
- Access
- No sign-in
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Capabilities
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Provenance
- Discovered
- Relayed by agntcy
- Identifier
- urn:air:outshift.io:agntcy:msa-structure-prediction-pipeline
- Catalog host
- outshift.io · via agntcy registry
- Anchor check
- Not anchored
- Last crawled
- seen 5h ago
Discovered through outshift.io's registry, not anchored by StealthStack. We relay the listing as-is; we have not checked that the URN authority matches the publishing host. How trust works →